







This is the future of scientific papers. Instead of a PDF, the paper is an AI agent that you can talk to, ask questions, run analyses. No more digging through supplements - just ask the paper directly: "what p-value cutoff was used in Fig 3B? Re-run at 0.01." nature.com/articles/s41586-026-11044-y
Reimagining research papers as interactive and reliable AI agents - Nature
www.nature.comSep 17, 2026 at 2:47 AM
The Bazaar of Scientific Knowledge | shishyko!
Is the current form of the scientific paper still optimal in 2025? How do we preserve, and efficiently leverage, the uncut gems of the scientific process?
Are Scientific Papers Bad?
Is the scientific paper due to be replaced?
AI is pushing scientific publishing to the brink. For neuroscience, the crisis may be an opportunity to finally connect findings across subfields.

Is the scientific paper due to be replaced?
AI is pushing scientific publishing to the brink. For neuroscience, the crisis may be an opportunity to finally connect findings across subfields.

Maybe scientific progress isn’t slowing, after all
A new paper takes aim at the claim that science has become less disruptive

Speculations on the Future of the Scientific Method
The following essay was published 20 years ago (January, 2006) on my blog The Technium. I edited the intro here, but the speculations are basically unchanged.

Is the scientific paper still a fraud?
How we write scientific papers does not reflect how we do science. Their formal structure infers a pre-ordained linear process rather than reflecting the messy creativity of research. This matters in the AI age because it masks the human in the process.
The new way we’ll do science
Papers should become human-readable views over a graph of data, tools, results, and certificates.

No. 009: AI agents p-hacking, submission surge data, Gemini for Science - The Hallway Track
The Hallway Track No. 009 - How AI is affecting the practice of science

No. 026: AI use in science study, astronomy disclosure gap, Paper2Agent, SAIR initiative - The Hallway Track
The Hallway Track No. 026 - How AI is affecting the practice of science

It’s time to get rid of the peer-reviewed paper
The peer-reviewed journal article, perhaps the single most important device behind the expansion of scientific knowledge in the last century, is an extraordinarily expensive way to share novelty: e…

No. 003: Bixonimania hoax, Google's paper-writing agents, AlphaFold expands the frontier - The Hallway Track
The Hallway Track No. 003 - How AI is affecting the practice of science

(PDF) Peer Reviewers Should be Allowed to Upload Manuscripts to AI
PDF | Publishers bar peer reviewers-but not authors or editors-from feeding manuscripts to AI. Cited confidentiality concerns don't survive scrutiny.... | Find, read and cite all the research you need on ResearchGate

No. 013: Provenance vocabulary, Wikipedia contamination, OpenAI rare-disease diagnoses, ARA paper format - The Hallway Track
The Hallway Track No. 013 - How AI is affecting the practice of science

No. 028: arXiv rate limit, AI paper mills, Google FluSight - The Hallway Track
The Hallway Track No. 028 - How AI is affecting the practice of science

New preprint! We introduce a new benchmark, SciConBench, with 9.11k scientific questions derived from Cochrane Systematic Reviews. We find evidence that frontier AI agents **cannot** synthesize scientific conclusions well. A thread 🧵 w/ @hayoungjung.bsky.social & others!