Products like @margin.at and @semble.so have the potential to change scientific publishing as we know it today. These are early-stage products but they're clearly ahead of the curve when it comes to new ways to organize and share knowledge.
Jul 26, 2026 at 3:03 PM
The Bazaar of Scientific Knowledge | shishyko!
Is the current form of the scientific paper still optimal in 2025? How do we preserve, and efficiently leverage, the uncut gems of the scientific process?
Reclaiming scientific publishing: Our duty to make science freely accessible to all
When we (Camille Thomas and Romain Vaucher speaking) entered academia as graduate students in France and Switzerland, we were enthusiastic about the vast amount of research available with a simple click on our university computers. However, we also quickly felt disheartened by the significant amount of research work we couldn’t access when wrapping up our theses from home. Luckily, pirates existed. Empowered by Aaron Swartz’s Guerilla Open Access Manifesto, Alexandra Elbakyan created Sci-Hub in 2011, the greatest leak of scientific knowledge of the century. We felt right in the middle of an Open Access (OA) revolution that would finally make all scientific articles, old and new, accessible to everyone. Fifteen years later, our hopes as idealistic early-career researchers have been crushed by the oligopolistic model of scientific publishing and the subtle pressures of the “publish or perish” culture that reigns over our career development. In the meantime, publishers like Frontiers, MDPI and Springer Nature, to name a few, have exponentially expanded their number of titles. They have become increasingly exploitative of scholarly manpower, moving far away from the genuine accessibility they allegedly promised under the guise of this OA transformation. Open Access is to be praised, but the way it has been implemented through the mainstream Gold and Green OA models now primarily serves the status quo of large for-profit publishers. These entities hijack public money and voluntary editorial labour for their own profit and that of their shareholders (Butler et al., 2023; Shu and Larivière, 2024). In a nutshell, to offer reader accessibility, the Gold OA model requires authors to pay an Article Processing Charge (APC; around 2,000 $/€, rarely less, and often much more) covered by individual research funds, funding agencies or university library deals. The Green OA model allows authors to upload their accepted, non-formatted manuscripts to repositories after an embargo period. While both models allow compliance with funding agency mandates, true equity and accessibility are ultimately left behind. In an article we recently published (Vaucher and Thomas, 2026), we describe the mechanisms through which we, as researchers, inadvertently contribute to keeping research exclusive while driving the publishing model down an unsustainable path. Just like our broader economy, our publishing model and the ways science is evaluated fuelled a predatory system that demands more papers, funding and prestige at an ever-faster rate (Walter and Mullins, 2019), likely at the expense of quality, diversity and ethics (Frank et al., 2023; Heen and Vogt, 2024). These concerns aren’t entirely new. What is new, however, is the growing realisation among societies, universities and funding bodies that we must move away from this system. Initiatives like the European Diamond Capacity Hub, ALMASI and craft-OA are actively paving a way forward that we, as scientists, have yet to fully embrace. In the geosciences, a collective and concerted effort is currently being made by researchers to provide fairer, more sustainable alternatives through community-driven Diamond OA journals (which feature no APCs and completely free access to published articles). Volcanica (Farquharson and Wadsworth, 2018), Sedimentologika (Thomas et al., 2023), Tektonika (Fernández-Blanco et al., 2023), Seismica (Rowe et al., 2022), Geomorphica (Lefebvre et al., 2025), Open Paleontology (Drage et al., 2024), Advances in Geochemistry and Cosmochemistry (Pourret et al., 2025), Geodynamica, jSEDI and Planetary Research are all recently created, scholarly-run journals funded by university library investments to promote better ways of publishing. Their articles are peer-reviewed, free for readers to access, and free for authors to publish. They rely entirely on the voluntary involvement of scientists running open-source editorial platforms (such as Open Journal Systems), transparent workflows, copyediting, production and final dissemination. Diamond OA journals offer an alternative path for all of us to transform our broken publishing system and reclaim ownership of our own science. These efforts go hand in hand with greater involvement in our academic societies and non-profit publishing initiatives. Ultimately, real transformation can only happen if all of us as researchers realise how inherently unfair and exclusive the current system is to labs and institutions that cannot afford steep Gold OA APCs or paywalled journal subscriptions. It also means we must collectively stop evaluating science based on journal prestige and the flawed metrics they own (Posada and Chen, 2018; Sabel and Larhammar, 2025; Simons, 2008). Only by breaking these habits can we truly make knowledge accessible to all. References Butler, L.-A., Matthias, L., Simard, M.-A., Mongeon, P., and Haustein, S.: The oligopoly’s shift to open access: How the big five academic publishers profit from article processing charges, Quantitative Science Studies, 4, 778–799, https://doi.org/10.1162/qss_a_00272, 2023. Drage, H. B., Keating, J. N., Nielsen, M. L., Saleh, F., and Hearing, T. W. W.: Open Palaeontology: a new model of diamond open access journal for palaeontology, Open Palaeontology, 1, 1–6, https://doi.org/10.26034/la.opal.2024.6223, 2024. Farquharson, J. I. and Wadsworth, F. B.: Introducing Volcanica: The first diamond open-access journal for volcanology, Volcanica, 1, I–IX, https://doi.org/10.30909/vol.01.01.i-ix, 2018. Fernández-Blanco, D., Lacassin, R., Gouiza, M., Perez-Diaz, L., Magee, C., McCarthy, D., Doré, T., Péron-Pinvidic, G., Kavanagh, J., Bond, C., and Schmitt, R.: Tektonika: The Community-Led Diamond Open-Access Journal for Tectonics and Structural Geology, τeκτoniκa, 1, I–XIII, https://doi.org/10.55575/tektonika2023.1.1.56, 2023. Frank, J., Foster, R., and Pagliari, C.: Open access publishing – noble intention, flawed reality, Social Science & Medicine, 317, 115592, https://doi.org/10.1016/j.socscimed.2022.115592, 2023. Heen, E. and Vogt, H.: Scientific rot: Unsustainable publishing practices threatens trust in medicine, Journal of Evaluation in Clinical Practice, 30, 941–944, https://doi.org/10.1111/jep.13989, 2024. Lefebvre, A., Bosch, R., Burrows, K., Giaime, M., Goodwin, G., Lai, L. S.-H., Stammler, M., and Fernández, R.: Geomorphica: The most accessible journal for the geomorphology community, Geomorphica, 1, https://doi.org/10.59236/geomorphica.v1i1.54, 2025. Posada, A. and Chen, G.: Inequality in Knowledge Production: The Integration of Academic Infrastructure by Big Publishers, in: ELPUB 2018, https://doi.org/10.4000/proceedings.elpub.2018.30, 2018. Pourret, O., Millet, M.-A., Marin-Carbonne, J., Mallik, A., Tierney, J. E., Darling, J. R., Kiseeva, E. S., Torres, M. A., Fonseca, R. O. C., Tartèse, R., Namur, O., Klöcking, M., Matthews, S. W., Dahrén, B., Ickert, R. B., and Board, the inaugural A. in G. and C. editorial: Equitable Access, Open Science, and the Future of Publishing in Geochemistry and Cosmochemistry, Advances in Geochemistry and Cosmochemistry, 1, https://doi.org/10.33063/agc.v1i1.770, 2025. Rowe, C., Agius, M., Convers, J., Funning, G., Galasso, C., Hicks, S., Huynh, T., Lange, J., Lecocq, T., Mark, H., Okuwaki, R., Ragon, T., Rychert, C., Teplitzky, S., and Van den Ende, M.: The launch of Seismica: a seismic shift in publishing, Seismica, 1, https://doi.org/10.26443/seismica.v1i1.255, 2022. Sabel, B. and Larhammar, D.: Reformation of science publishing: the Stockholm Declaration, R Soc Open Sci., 12, 251805, https://doi.org/10.1098/rsos.251805, 2025. Shu, F. and Larivière, V.: The oligopoly of open access publishing, Scientometrics, 129, 519–536, https://doi.org/10.1007/s11192-023-04876-2, 2024. Simons, K.: The Misused Impact Factor, Science, 322, 165–165, https://doi.org/10.1126/science.1165316, 2008. Thomas, C., Privat, A., Vaucher, R., Spychala, Y., Zuchuat, V., Marchegiano, M., Poyatos-Moré, M., Kane, I., and Chiarella, D.: Sedimentologika: a community-driven diamond open access journal in sedimentology, Sedimentologika, 2023. Vaucher, R. and Thomas, C.: Diamond is the new Green—Why Green Open Access is not a sustainable long-term model for scientific publishing, Sedimentologika, 4, https://doi.org/10.57035/journals/sdk.2026.e41.2397, 2026. Walter, P. and Mullins, D.: From symbiont to parasite: the evolution of for-profit science publishing, Molecular Biology of the Cell, https://doi.org/https://doi.org/10.1091/mbc.E19-03-0147, 2019.
Making sense of preprints by adding context – The Publish Your Reviews initiative - LSE Impact
Improving scientific publishing is often framed as an issue of openness and speed and less often as one of context. In this post, Ludo Waltman and Jessica Polka make the case for a more contextualised approach to open access publishing and preprinting, and introduce the Publish Your Reviews initiative. Launched today by ASAPbio, the initiative
Introducing Aris: The publishing platform for the Post-PDF Era - Aris
We're building the future of academic publishing: tools that make it easy to create, share, and preserve knowledge in formats designed for the web, not the printing press.
Coordinating Research Assessment And Publishing Reform: Action Groups – ASAPbio
Connect with focused ASAPbio groups working on specific aspects of scientific communication, from preprint review to community engagement.
A budding discipline around how science gets read and judged - Aris
Scholarly publishing spent thirty years arguing about access. It has barely begun arguing about what readers do with the paper once they have it. At Aris we call that second argument scholarly interface design. Mike Morrison's community calls it ScienceUX. Either way it is becoming a field, and here is why it is worth your attention.
The strain on scientific publishing
Scientists are increasingly overwhelmed by the volume of articles being published. Total articles indexed in Scopus and Web of Science have grown exponentially in recent years; in 2022 the article total was approximately ~47% higher than in 2016, which has outpaced the limited growth - if any - in the number of practising scientists. Thus, publication workload per scientist (writing, reviewing, editing) has increased dramatically. We define this problem as the strain on scientific publishing. To analyse this strain, we present five data-driven metrics showing publisher growth, processing times, and citation behaviours. We draw these data from web scrapes, requests for data from publishers, and material that is freely available through publisher websites. Our findings are based on millions of papers produced by leading academic publishers. We find specific groups have disproportionately grown in their articles published per year, contributing to this strain. Some publishers enabled this growth by adopting a strategy of hosting special issues, which publish articles with reduced turnaround times. Given pressures on researchers to publish or perish to be competitive for funding applications, this strain was likely amplified by these offers to publish more articles. We also observed widespread year-over-year inflation of journal impact factors coinciding with this strain, which risks confusing quality signals. Such exponential growth cannot be sustained. The metrics we define here should enable this evolving conversation to reach actionable solutions to address the strain on scientific publishing.
From Albums to Streams: How Modularity Changes Systems
Scientific publishing is breaking under document-centric formats designed for a physical world. Borrowing from music’s shift from albums to streaming, we make the case that open access alone cannot deliver reuse, trust, or scale. The future of science depends on modular, interoperable research components that move across tools, enabling new workflows, tools, and ecosystems.
Single-Source Publishing Community
Join the Single-Source Publishing Community for open, interoperable, and sustainable scholarly publishing workflows.
Wish there was a better academic publishing system? Bluesky and its underlying ATProto technology, along with services like @chive.pub and the broader @atproto.science ecosystem, could do the job. #AcademicSky 🧪 leaflet.pub/2f431faf-c125-4d34-ac52-e41a2…
Each academic paper should have its own Bluesky account
leaflet.pub
Chive
We're ramping up our alpha, and we'd love for you to join at chive.pub! Since we launched back in January, we've been adding a ton of fun features; and to introduce them, we're going to be doing a series of deep dives over the next couple weeks on chive.leaflet.pub.
After reading about ATProto stuff this morning I realised that one possible future for science publishing, within something like @atproto.science, is that every scientist becomes their own journal. The key realisation is that a paper published to my own PDS can be published in many journals.
We're thinking about publishing a compendium of #ATScience projects submitted to the workshop (incl abstracts, preprints and published works) - @aaronstevenwhite.io could @chive.pub potentially support that use case?
@margin.at and @semble.so, welcome to anypub.at Currently read only, you can now view your collections for inspiration for your blogs
Great post! There is a clear parallel to how the @atproto.science ecosystem can disrupt the extractive science publishing industry & bring on millions of researchers with a new cooperative research stack. The system is ripe for disruption - see also @edhagen.net's post in the thread linked below >
Joe Basser
Who wants to make money in the Atmosphere? 🙋♂️
Super cool! Imagining how something like this could be used for @atproto.science "journal" publishing
Standard Reader
New Feature: Collections on Standard Reader. Curate articles from across the network into magazine editions. Include your editorial intro, notes on each piece, a closing statement and a theme. Publish as a series readers can follow. Tell a story. Check out the first one 👇
