Many mathematical objects can be represented as functors from finitely-presented categories $\mathsf{C}$ to $\mathsf{Set}$. For instance, graphs are functors to $\mathsf{Set}$ from the category with two parallel arrows. Such functors are known informally as $\mathsf{C}$-sets. In this paper, we describe and implement an extension of $\mathsf{C}$-sets having data attributes with fixed types, such as graphs with labeled vertices or real-valued edge weights. We call such structures "acsets," short for "attributed $\mathsf{C}$-sets." Derived from previous work on algebraic databases, acsets are a joint generalization of graphs and data frames. They also encompass more elaborate graph-like objects such as wiring diagrams and Petri nets with rate constants. We develop the mathematical theory of acsets and then describe a generic implementation in the Julia programming language, which uses advanced language features to achieve performance comparable with specialized data structures.
Relational foundations for functorial data migration | Proceedings of the 15th Symposium on Database Programming Languages
In this paper we present a simple database definition language: that of categories and functors. A database schema is a small category and an instance is a set-valued functor on it. We show that morphisms of schemas induce three ''data migration ...
Functorial data migration
In this paper we present a simple database definition language: that of categories and functors. A database schema is a small category and an instance is a set-valued functor on it. We show that morphisms of schemas induce three “data migration functors”, which translate instances from one schema to the other in canonical ways. These functors parameterize projections, unions, and joins over all tables simultaneously and can be used in place of conjunctive and disjunctive queries. We also show how to connect a database and a functional programming language by introducing a functorial connection between the schema and the category of types for that language. We begin the paper with a multitude of examples to motivate the definitions, and near the end we provide a dictionary whereby one can translate database concepts into category-theoretic concepts and vice versa.
The operad of wiring diagrams: formalizing a graphical language for databases, recursion, and plug-and-play circuits
Wiring diagrams, as seen in digital circuits, can be nested hierarchically and thus have an aspect of self-similarity. We show that wiring diagrams form the morphisms of an operad $\mcT$, capturing this self-similarity. We discuss the algebra $\Rel$ of mathematical relations on $\mcT$, and in so doing use wiring diagrams as a graphical language with which to structure queries on relational databases. We give the example of circuit diagrams as a special case. We move on to show how plug-and-play devices and also recursion can be formulated in the operadic framework as well. Throughout we include many examples and figures.
Combinators for bidirectional tree transformations: A linguistic approach to the view-update problem: ACM Transactions on Programming Languages and Systems: Vol 29, No 3
We propose a novel approach to the view-update problem for tree-structured data: a domain-specific programming language in which all expressions denote bidirectional transformations on trees. In one direction, these transformations---dubbed lenses---map ...
Categories of Containers
We introduce the notion of containers as a mathematical formalisation of the idea that many important datatypes consist of templates where data is stored. We show that containers have good closure properties under a variety of constructions including the formation of initial algebras and final coalgebras. We also show that containers include strictly positive types and shapely types but that there are containers which do not correspond to either of these. Further, we derive a representation result classifying the nature of polymorphic functions between containers. We finish this paper with an application to the theory of shapely types and refer to a forthcoming paper which applies this theory to differentiable types.
Algebraic data integration
In this paper, we develop an algebraic approach to data integration by combining techniques from functional programming, category theory, and database theory. In our formalism, database schemas and instances are algebraic (multi-sorted equational) theories of a certain form. Schemas denote categories, and instances denote their initial (term) algebras. The instances on a schema S form a category, S–Inst, and a morphism of schemas F : S → T induces three adjoint data migration functors: ΣF : S–Inst → T–Inst, defined by substitution along F, which has a right adjoint ΔF : T–Inst → S–Inst, which in turn has a right adjoint ΠF : S–Inst → T–Inst. We present a query language based on for/where/return syntax where each query denotes a sequence of data migration functors; a pushout-based design pattern for performing data integration using our formalism; and describe the implementation of our formalism in a tool we call AQL (Algebraic Query Language).
Profunctor Optics, a Categorical Update
Optics are bidirectional data accessors that capture data transformation patterns such as accessing subfields or iterating over containers. Profunctor optics are a particular choice of representation supporting modularity, meaning that we can construct accessors for complex structures by combining simpler ones. Profunctor optics have previously been studied only in an unenriched and non-mixed setting, in which both directions of access are modelled in the same category. However, functional programming languages are arguably better described by enriched categories; and we have found that some structures in the literature are actually mixed optics, with access directions modelled in different categories. Our work generalizes a classic result by Pastro and Street on Tambara theory and uses it to describe mixed V-enriched profunctor optics and to endow them with V-category structure. We provide some original families of optics and derivations, including an elementary one for traversals. Finally, we discuss a Haskell implementation.
Category Theory for Programmers: The Preface
Table of Contents Part One Category: The Essence of Composition Types and Functions Categories Great and Small Kleisli Categories Products and Coproducts Simple Algebraic Data Types Functors Functo…
Functional Query Languages with Categorical Types
We study three category-theoretic types in the context of functional query languages (typed lambda-calculi extended with additional operations for bulk data processing). The types we study are:
Coeffects: a calculus of context-dependent computation
The notion of context in functional languages no longer refers just to variables in scope. Context can capture additional properties of variables (usage patterns in linear logics; caching requirements in dataflow languages) as well as additional resources or properties of the execution environment (rebindable resources; platform version in a cross-platform application). The recently introduced notion of coeffects captures the latter, whole-context properties, but it failed to capture fine-grained per-variable properties.We remedy this by developing a generalized coeffect system with annotations indexed by a coeffect shape. By instantiating a concrete shape, our system captures previously studied flat (whole-context) coeffects, but also structural (per-variable) coeffects, making coeffect analyses more useful. We show that the structural system enjoys desirable syntactic properties and we give a categorical semantics using extended notions of indexed comonad.The examples presented in this paper are based on analysis of established language features (liveness, linear logics, dataflow, dynamic scoping) and we argue that such context-aware properties will also be useful for future development of languages for increasingly heterogeneous and distributed platforms.
GATlab: Modeling and Programming with Generalized Algebraic Theories
Categories and categorical structures are increasingly recognized as useful abstractions for modeling in science and engineering. To uniformly implement category-theoretic mathematical models in software, we introduce GATlab, a domain-specific language for algebraic specification embedded in a technical programming language. GATlab is based on generalized algebraic theories (GATs), a logical system extending algebraic theories with dependent types so as to encompass category theory. Using GATlab, the programmer can specify generalized algebraic theories and their models, including both free models, based on symbolic expressions, and computational models, defined by arbitrary code in the host language. Moreover, the programmer can define maps between theories and use them to declaratively migrate models of one theory to models of another. In short, GATlab aims to provide a unified environment for both computer algebra and software interface design with generalized algebraic theories. In this paper, we describe the design, implementation, and applications of GATlab.
Bidirectional Programming Languages
The need to edit source data through a view arises in a host of applications across many different areas of computing. Unfortunately, few existing systems provide support for updatable views. In practice, when they are needed, updatable views are usually implemented using two separate programs: one that computes the view from the source and another that handles updates. This rudimentary design is tedious for programmers, difficult to reason about, and a nightmare to maintain. This dissertation presents bidirectional programming languages, which provide an elegant and effective mechanism for describing updatable views. Unlike programs written in an ordinary language, which only work in one direction, programs in a bidirectional language can be run both forwards and backwards: from left to right, they describe functions that map sources to views, and from right to left, they describe functions that map updated views back to updated sources. Besides eliminating redundancy, these languages can be designed to ensure correctness, guaranteeing by construction that the two functions work well together. Starting from the foundations, we define a general semantic space of well-behaved bidirectional transformations called lenses. Then, building on this foundation, we describe a particular language for defining lenses on strings with syntax based on the familiar regular operators (union, concatenation, and Kleene star). We present extensions to the basic framework that address the subtle complications that arise when lenses are used to manipulate, data containing unimportant details, ordered data, and confidential data.
Ologs: A Categorical Framework for Knowledge Representation
In this paper we introduce the olog, or ontology log, a category-theoretic model for knowledge representation (KR). Grounded in formal mathematics, ologs can be rigorously formulated and cross-compared in ways that other KR models (such as semantic networks) cannot. An olog is similar to a relational database schema; in fact an olog can serve as a data repository if desired. Unlike database schemas, which are generally difficult to create or modify, ologs are designed to be user-friendly enough that authoring or reconfiguring an olog is a matter of course rather than a difficult chore. It is hoped that learning to author ologs is much simpler than learning a database definition language, despite their similarity. We describe ologs carefully and illustrate with many examples. As an application we show that any primitive recursive function can be described by an olog. We also show that ologs can be aligned or connected together into a larger network using functors. The various methods of information flow and institutions can then be used to integrate local and global world-views. We finish by providing several different avenues for future research.
A theory of type polymorphism in programming
The aim of this work is largely a practical one. A widely employed style of programming, particularly in structure-processing languages which impose n…
Computational category theory
Computational category theory by D. E. Rydeheard, 1988, Prentice Hall edition, in English
Abstract syntax and variable binding
We develop a theory of abstract syntax with variable binding. To every binding signature we associate a category of models consisting of variable sets endowed with compatible algebra and substitution structures. The syntax generated by the signature is the initial model. This gives a notion of initial algebra semantics encompassing the traditional one; besides compositionality, it automatically verifies the semantic substitution lemma.