







This paper formalizes biological intelligence as search efficiency in multi-scale problem spaces, aiming to resolve epistemic deadlocks in the basal “cognition wars” unfolding in the Diverse Intelligence research program. It extends classical work on symbolic problem-solving to define a novel problem space lexicon and search efficiency metric. Construed as an operationalization of intelligence, this metric is the decimal logarithm of the ratio between the cost of a random walk and that of a biological agent. Thus, the search efficiency measures how many orders of magnitude of dissipative work an agentic policy saves relative to a maximal-entropy search strategy. Empirical models for amoeboid chemotaxis and barium-induced planarian head regeneration show that, under conservative (i.e., intelligence-underestimating) assumptions, even ‘simple’ organisms are from two-hundred- to sextillion-fold more efficient in problem space exploration. In this sense, the deep insights of neuroscience are not about neurons per se, but about the policies and patterns of physics and mathematics that function as a kind of “cognitive glue” binding parts toward higher levels of collective intelligence in wholes of highly diverse composition and origin. Therefore, our synthesis argues that the “mark of the cognitive” is perhaps better sought in the measurable efficiency with which living systems, from single cells to complex organisms, traverse energy and information gradients to tame combinatorial explosions-one problem space at a time.
The Abstraction Fallacy: Why AI Can Simulate But Not Instantiate Consciousness
Computational functionalism dominates current debates on AI consciousness. This is the hypothesis that subjective experience emerges entirely from abstract causal topology, regardless of the underlying physical substrate. We argue this view fundamentally mischaracterizes how physics relates to information. We call this mistake the Abstraction Fallacy. Tracing the causal origins of abstraction reveals that symbolic computation is not an intrinsic physical process. Instead, it is a mapmaker-dependent description. It requires an active, experiencing cognitive agent to alphabetize continuous physics into a finite set of meaningful states. Consequently, we do not need a complete, finalized theory of consciousness to assess AI sentience—a demand that simply pushes the question beyond near-term resolution and deepens the AI welfare trap. What we actually need is a rigorous ontology of computation. The framework proposed here explicitly separates simulation (behavioral mimicry driven by vehicle causality) from instantiation (intrinsic physical constitution driven by content causality). Establishing this ontological boundary shows why algorithmic symbol manipulation is structurally incapable of instantiating experience. Crucially, this argument does not rely on biological exclusivity. If an artificial system were ever conscious, it would be because of its specific physical constitution, never its syntactic architecture. Ultimately, this framework offers a physically grounded refutation of computational functionalism to resolve the current uncertainty surrounding AI consciousness.
Technological Approach to Mind Everywhere: An Experimentally-Grounded Framework for Understanding Diverse Bodies and Minds
Synthetic biology and bioengineering provide the opportunity to create novel embodied cognitive systems (otherwise known as minds) in a very wide variety of chimeric architectures combining evolved and designed material and software. These advances are disrupting familiar concepts in the philosophy of mind, and require new ways of thinking about and comparing truly diverse intelligences, whose composition and origin are not like any of the available natural model species. In this Perspective, I introduce TAME-Technological Approach to Mind Everywhere-a framework for understanding and manipulating cognition in unconventional substrates. TAME formalizes a non-binary (continuous), empirically-based approach to strongly embodied agency. TAME provides a natural way to think about animal sentience as an instance of collective intelligence of cell groups, arising from dynamics that manifest in similar ways in numerous other substrates. When applied to regenerating/developmental systems, TAME suggests a perspective on morphogenesis as an example of basal cognition. The deep symmetry between problem-solving in anatomical, physiological, transcriptional, and 3D (traditional behavioral) spaces drives specific hypotheses by which cognitive capacities can increase during evolution. An important medium exploited by evolution for joining active subunits into greater agents is developmental bioelectricity, implemented by pre-neural use of ion channels and gap junctions to scale up cell-level feedback loops into anatomical homeostasis. This architecture of multi-scale competency of biological systems has important implications for plasticity of bodies and minds, greatly potentiating evolvability. Considering classical and recent data from the perspectives of computational science, evolutionary biology, and basal cognition, reveals a rich research program with many implications for cognitive science, evolutionary biology, regenerative medicine, and artificial intelligence.

What Is Intelligence? Lessons from AI About Evolution, Computing, and Minds | Blaise Agüera y Arcas
Many Minds: Science, AI, and illusions of understanding
AI will fundamentally transform science. It will supercharge the research process, making it faster and more efficient and broader in scope. It will make scientists themselves vastly more productive, more objective, maybe more creative. It will make many human participants—and probably some human scientists—obsolete… Or at least these are some of the claims we are hearing these days. There is no question that various AI tools could radically reshape how science is done, and how much science is done. What we stand to gain in all this is pretty clear. What we stand to lose is less obvious, but no less important. My guest today is . Molly is a Professor in the Department of Psychology and the University Center for Human Values at Princeton University. In a recent , Molly and the anthropologist presented a framework for thinking about the different roles that are being imagined for AI in science. And they argue that, when we adopt AI in these ways, we become vulnerable to certain illusions. Here, Molly and I talk about four visions of AI in science that are currently circulating: AI as an Oracle, as a Surrogate, as a Quant, and as an Arbiter. We talk about the very real problems in the scientific process that AI promises to help us solve. We consider the ethics and challenges of using Large Language Models as experimental subjects. We talk about three illusions of understanding the crop up when we uncritically adopt AI into the research pipeline—an illusion that we understand more than we actually do; an illusion that we're covering a larger swath of a research space than we actually are; and the illusion that AI makes our work more objective. We also talk about how ideas from Science and Technology Studies (or STS) can help us make sense of this AI-driven transformation that, like it or not, is already upon us. Along the way Molly and I touch on: AI therapists and AI tutors, anthropomorphism, the culture and ideology of Silicon Valley, Amazon's Mechanical Turk, fMRI, objectivity, quantification, Molly's mid-career crisis, monocultures, and the squishy parts of human experience. Without further ado, on to my conversation with Dr. Molly Crockett. Enjoy! A transcript of this episode is available . Notes and links 5:00 – For more on LLMs—and the question of whether we understand how they work—see our with Murray Shanahan. 9:00 – For the paper by Dr. Crockett and colleagues about the social/behavioral sciences and the COVID-19 pandemic, see . 11:30 – For Dr. Crockett and colleagues’ work on outrage on social media, see this . 18:00 – For a recent exchange on the prospects of using LLMs in scientific peer review, see . 20:30 – Donna Haraway’s essay, 'Situated Knowledges: The Science Question in Feminism and the Privilege of Partial Perspective’, is . See also Dr. Haraway's book, . 22:00 – For the recent essay by Henry Farrell and others on AI as a cultural technology, see . 23:00 – For a recent report on chatbots driving people to mental health crises, see . 25:30 – For the already-classic “stochastic parrots” article, see . 33:00 – For the study by Ryan Carlson and Dr. Crockett on using crowd-workers to study altruism, see . 34:00 – For more on the “illusion of explanatory depth,” see with Tania Lombrozo. 53:00 – For more about Ohio State’s plans to incorporate AI in the classroom, see . For a recent essay by Dr. Crockett on the idea of “techno-optimism,” see . Recommendations , by Adam Becker , by L. A. Paul , by Miranda Fricker Many Minds is a project of the , which is made possible by a generous grant from the John Templeton Foundation to Indiana University. The show is hosted and produced by , with help from Assistant Producer and with creative support from DISI Directors Erica Cartmill and Jacob Foster. Our artwork is by . Our transcripts are created by . Subscribe to Many Minds on Apple, Stitcher, Spotify, Pocket Casts, Google Play, or wherever you listen to podcasts. You can also now subscribe to the Many Minds newsletter ! We welcome your comments, questions, and suggestions. Feel free to email us at: manymindspodcast@gmail.com. For updates about the show, visit or follow us on Twitter () or Bluesky ().
Learning Outside the Brain: Integrating Cognitive Science and Systems Biology
Learning is commonplace in organisms such as ourselves and even in organisms as far distant as the bee and the octopus. Such learning is implemented by brains, or neuronal networks, and has been extensively studied within ethology, psychology, cognitive science, and neuroscience. Whether learning also takes place in nonneuronal settings has remained a matter of sustained controversy, too often dominated by ideological views. In this survey, I will explain how learning can be rigorously interpreted as a form of information processing and then explore the evidence for whether learning also takes place in organismal contexts outside the brain, such as physiology, development, and individual cells. I will try to explain why it is important to build bridges in this way between cognitive science and systems biology, why concepts and methods from various branches of engineering may be helpful in this task, and what the eventual impact may be on how we think about the organism.
Performative Thinking? The Brittle Correlation Between CoT Length and Problem Complexity
Intermediate token generation (ITG), where a model produces output before the solution, has been proposed as a method to improve the performance of language models on reasoning tasks. While these reasoning traces or Chain of Thoughts (CoTs) are correlated with performance gains, the mechanisms underlying them remain unclear. A prevailing assumption in the community has been to anthropomorphize these tokens as "thinking", treating longer traces as evidence of higher problem-adaptive computation. In this work, we critically examine whether intermediate token sequence length reflects or correlates with problem difficulty. To do so, we train transformer models from scratch on derivational traces of the A* search algorithm, where the number of operations required to solve a maze problem provides a precise and verifiable measure of problem complexity. We first evaluate the models on trivial free-space problems, finding that even for the simplest tasks, they often produce excessively long reasoning traces and sometimes fail to generate a solution. We then systematically evaluate the model on out-of-distribution problems and find that the intermediate token length and ground truth A* trace length only loosely correlate. We notice that the few cases where correlation appears are those where the problems are closer to the training distribution, suggesting that the effect arises from approximate recall rather than genuine problem-adaptive computation. This suggests that the inherent computational complexity of the problem instance is not a significant factor, but rather its distributional distance from the training data. These results challenge the assumption that intermediate trace generation is adaptive to problem difficulty and caution against interpreting longer sequences in systems like R1 as automatically indicative of "thinking effort".

Performative Thinking? The Brittle Correlation Between CoT Length and Problem Complexity
Intermediate token generation (ITG), where a model produces output before the solution, has been proposed as a method to improve the performance of language models on reasoning tasks. While these reasoning traces or Chain of Thoughts (CoTs) are correlated with performance gains, the mechanisms underlying them remain unclear. A prevailing assumption in the community has been to anthropomorphize these tokens as "thinking", treating longer traces as evidence of higher problem-adaptive computation. In this work, we critically examine whether intermediate token sequence length reflects or correlates with problem difficulty. To do so, we train transformer models from scratch on derivational traces of the A* search algorithm, where the number of operations required to solve a maze problem provides a precise and verifiable measure of problem complexity. We first evaluate the models on trivial free-space problems, finding that even for the simplest tasks, they often produce excessively long reasoning traces and sometimes fail to generate a solution. We then systematically evaluate the model on out-of-distribution problems and find that the intermediate token length and ground truth A* trace length only loosely correlate. We notice that the few cases where correlation appears are those where the problems are closer to the training distribution, suggesting that the effect arises from approximate recall rather than genuine problem-adaptive computation. This suggests that the inherent computational complexity of the problem instance is not a significant factor, but rather its distributional distance from the training data. These results challenge the assumption that intermediate trace generation is adaptive to problem difficulty and caution against interpreting longer sequences in systems like R1 as automatically indicative of "thinking effort".

The Umwelt Representation Hypothesis: rethinking Universality
Recent studies reveal striking representational alignment between artificial neural networks (ANNs) and biological brains, leading to proposals that all sufficiently capable systems converge on universal representations of reality. We argue that this claim of Universality is premature. We introduce the Umwelt Representation Hypothesis, which proposes that alignment arises not from convergence toward a single global optimum but from overlap in the ecological constraints under which systems develop. We review empirical evidence showing that representational differences between species, individuals, and ANNs are systematic and adaptive, which is difficult to reconcile with Universality. Finally, we reframe ANN model comparison as a method for mapping clusters of alignment in the ecological constraint space rather than as a search for a single optimal world model.

NeuroAI
Neuroscience, cognitive science, and AI are all questing for principles that help generalization. Learn more through a live, synchronous program designed for focused, hands-on learning.
The Law of Conservation of Information: Search Processes Only Redistribute Existing Information
Conservation of information sparked scientific interest once a recurring pattern was noticed in the evolutionary computing literature. In grappling with the creation of information through evolutionary algorithms, this literature consistently revealed that the information outputted by such algorithms always needed first to be programmed into them. Thus, the primary goal of this literature—to uncover how information could be created from scratch or de novo —was shown to be misconceived: the information was not created but instead shuffled around or smuggled in, implying that it already existed in some form or other. Information output in these situations therefore always presupposed a counterbalancing input of prior information. Once this pattern was seen, the next logical step was to quantify the amount of information inputted and outputted, demonstrating a consistent mathematical relation between the two. This led to the proof of a number of theorems about search. In these theorems, a baseline search with probability p of success gave way to an improved search with probability q of success. Typically p would be very small and close to zero, implying a practically impossible search (like searching for a needle in a haystack). By contrast, q would be much larger and close to one, implying an eminently doable search. The punchline of these theorems was that, as the improved search became itself the subject of a search (a search for a search , or S4S), the probability of finding it could not exceed p / q , rendering success of the improved search no more probable than success of the original baseline search, in effect filling one hole by digging another. Such conservation-of-information theorems, as they came to be called, were search-space specific, adapted to different kinds of search across a range of search spaces. There was a measure-theoretic theorem in which probability measures guided search. There were also function-theoretic and fitness-theoretic theorems where mappings into the search space as well as fitness functions on the search space respectively guided search. The key insight of this paper is that all these conservation-of-information theorems are special cases of a simple probabilistic relation based on elementary probability theory. This paper identifies the underlying rationale that makes all the previous conservation-of-information theorems work. In so doing, it provides a straightforward proof and general formulation of what may rightly be called the Law of Conservation of Information.
Are Biological Systems More Intelligent Than Artificial Intelligence?
Are biological self-organising systems more ``intelligent'' than artificial intelligence (AI)? If so, why? I address this question using a mathematical framework that defines intelligence in terms of adaptability. Systems are modelled as stacks of abstraction layers (\emph{Stack Theory}) and compared by how effectively they delegate agentic control down their stacks. I illustrate this using computational, biological, military, governmental, and economic systems. Contemporary AI typically relies on static, human-engineered stacks whose lower layers are fixed during deployment. Put provocatively, such systems resemble inflexible bureaucracies that adapt only top-down. Biological systems are more intelligent because they delegate adaptation. Formally, I prove a theorem (\emph{The Law of the Stack}) showing that adaptability at higher layers is bottlenecked by adaptability at lower layers. I further show that, under standard viability assumptions, maximising adaptability is equivalent to minimising variational free energy, implying that delegation is necessary for free-energy minimisation. Generalising bioelectric accounts of cancer as isolation from collective informational structures, I analyse cancer-like failure modes in non-biological systems when delegation is inadequate. This yields design principles for building robust systems via delegated control, and reframes hybrid agents (e.g. organoids or human--AI systems) as weak boundary-condition design problems in which constraints shape low-level policy spaces while preserving collective identity.

How AI coding is reshaping theoretical neuroscience
Agentic coding makes it possible to specify a neuroscience model in hours instead of months. Neuroscientists weigh in on that tectonic change.

AI That Evolves in the Wild | Edge.org
I’m interested not in domesticated AI—the stuff that people are trying to sell. I'm interested in wild AI—AI that evolves in the wild. I’m a naturalist, so that’s the interesting thing to me. Thirty-four years ago there was a meeting just like this in which Stanislaw Ulam said to everybody in the room—they’re all mathematicians—"What makes you so sure that mathematical logic corresponds to the way we think?" It’s a higher-level symptom. It’s not how the brain works. All those guys knew fully well that the brain was not fundamentally logical.
The lost art of mathematical modelling
We provide a critique of mathematical biology in light of rapid developments in modern machine learning. We argue that out of the three modelling activities – (1) formulating models; (2) analysing models; and (3) fitting or comparing models to data – inherent to mathematical biology, researchers currently focus too much on activity (2) at the cost of (1). This trend, we propose, can be reversed by realising that any given biological phenomenon can be modelled in an infinite number of different ways, through the adoption of a pluralistic approach, where we view a system from multiple, different points of view. We explain this pluralistic approach using fish locomotion as a case study and illustrate some of the pitfalls – universalism, creating models of models, etc. – that hinder mathematical biology. We then ask how we might rediscover a lost art: that of creative mathematical modelling.
TILOS HOT-AI Workshop: The Architecture of Intelligence with John Doyle
Embracing the suboptimal organization of the human brain
Human brain architecture is guiding brain-inspired artificial intelligence (AI) and has been treated as an optimal template, whose deviations could mark different psychiatric and neurological conditions. We argue this premise is wrong: under any single goal (e.g., minimal wiring cost or maximal communication efficiency), the human connectome is suboptimal. Instead, its organization reflects multi-objective trade-offs navigated over evolution and development under biological and environmental constraints. For psychopathology, atypical trajectories are not distances from an ideal brain but reweighted compromises in the same trade-off space. For neuro-AI, directly duplicating the brain’s connectivity risks copying its irrelevant compromises. Treating brains and models as products of multi-objective optimization and co-tuning relevant objectives offers a more powerful framework for interpreting clinical phenotypes and designing next-generation AI.
