







This screencast is the pre-recorded demo segment from the talk "Stackable Citation Knowledge: Building on Nanopublications for Climate and Biodiversity Research", delivered remotely at the CiTeX 2026 Workshop on Citation Extraction and Parsing (DIPF Leibniz Institute, Frankfurt, 28-29 May 2026) by Anne Fouilloux (LifeWatch ERIC) and Jean Iaquinta (Vitenhub AS). The demo walks through the third production path for citation- typed nanopublications: an expert reader annotates a citation found in someone else's paper, rather than the citing author declaring intent (Author path) or an LLM-extraction pipeline inferring it retroactively (Extract path). The annotation is published as a signed CiTO Citation nanopub on the open Science Live network — ORCID-attributed, immutable via Trusty URI, and contestable by counter-nanopubs. Worked example: while reading Wernberg et al. 2016 (Science, 353:169-172, "Climate-driven regime shift of a temperate marine ecosystem"), the reader infers that Wernberg cites reference 11 - Poloczanska et al. 2013 (Nature Climate Change, 3:919-925, "Global imprint of climate change on marine life") - as the global authority for climate-driven marine species redistribution. The annotation is published to Science Live with relation cito:citesAsAuthority and a one-sentence rationale tying it to the authors' planned Mediterranean Iberian extension. This is the alternative to LLM-based citation intent extraction: same downstream signed nanopub, human expert reader instead of a language model in the loop. Complements OpenCitations, WikiCite, and CiTO-extraction tools (GROBID, CEC, GRAPHIA, OFFZIB) by providing a citable target for any typed-citation output. Tools used: - Science Live Zotero plugin (Zotero 7+, plugin v1.0.6) - Science Live platform (platform.sciencelive4all.org) - Citation with CiTO template (built on CiTO and FaBiO ontologies) Related materials: - Talk repository (Slidev source, demo script, references): https://github.com/ScienceLiveHub/citex2026-stackable-citations - Live deck: https://sciencelive4all.org/citex2026-stackable-citations/ - CiTeX 2026 workshop: https://sites.google.com/view/workshop-on-citation-extractio/
NLnet; Nanoarguments
Scientific knowledge is currently scattered across papers, repositories, and disconnected platforms, with no structured way to trace how claims connect to evidence or how arguments develop. Nanoarguments builds a framework and tools for creating, browsing, and contributing to a global, federated graph of scientific discourse and evidence. Researchers and their communities can collaboratively structure claims, evidence chains, and discussion as nanopublications, which are small, cryptographically signed Linked Data snippets with precise provenance and authorship, published to a decentralized peer-to-peer network. The project builds upon the Nanodash interface to help users browse, edit, and aggregate discourse and evidence graphs, and integrates with dokieli to enable in-context authoring of nanopublications as inline annotations while reading or writing a document. A bidirectional ActivityPub connector bridges the nanopublication network and the fediverse, allowing discourse threads to start as social exchanges and crystallize into persistent, machine-readable evidence records. The project will be piloted with early adopter research groups in discourse and evidence modeling. All components will be released as open-source modules that other systems can build upon.
Citing Less Critically: LLMs Reshape the Rhetoric and Reach of Scientific Citation
Scientific citations carry rhetorical intent. Scholars may cite prior work positively (supporting), negatively (contrasting), or neutrally (mentioning). As large language models (LLMs) increasingly assist scientific writing, whether they reproduce citations with the same rhetorical intent as humans remains unclear. We introduce a masked-citation task to compare human and LLM-generated citation behavior. For each citation context, an LLM generates a replacement citation sentence, producing a counterfactual corpus directly comparable to human citation. We analyze what, whom, and how models cite, using an LLM-as-a-judge to classify citation intent and a 20-million-edge coauthorship network to measure social distance between cited authors. Across six popular LLMs and 1,746 top NLP conference papers (63k+ contexts, 132k+ citations), three patterns emerge: (1) Compared with human citation, LLMs cite significantly less critically; (2) LLMs over-cite popular and older papers, a tendency amplified for contrasting citations where human writing more often draws on recent, niche work; (3) Whereas humans often cite within their close social network, especially for supporting citations, LLMs tend to draw on more socially distant authors. Together, these differences are double-edged: LLM citation reaches beyond a scholar's close collaborators while being less critical and amplifying visibility bias, reshaping the rhetoric and reach of scientific citation.

Scientific Web Claims: A survey of definitions, tasks, datasets and methods
Scientific web claims are seen as scientific claims as observed on the Web, across social media, online news, and other platforms. The growing prevalence of scientific discussions on the Web has intensified the need to process and assess this specific type of claims. Unlike claims from scientific publications, scientific web claims are expressed in lay terms, are often decontextualized, and typically lack proper citations, which poses unique challenges for their identification, verification, and communication. Nevertheless, the correct processing of scientific web claims is crucial to keeping online science discussions accurate and informed, for instance through fact-checking. This survey provides the first systematic overview dedicated specifically to scientific web claims. We review and compare existing definitions, task formulations, datasets, and methodological approaches across three major perspectives: (1) Scientific fact-checking on the Web, (2) Scientific citations on the Web, and (3) Science communication on the Web. Our interdisciplinary analysis integrates insights from natural language processing, information retrieval, artificial intelligence, social sciences, and science communication. We identify major methodological challenges, including the lack of unified definitions, domain-agnostic corpora, and foundational models tailored to science-related online discourse. We also discuss challenges related to the existing interplay between emotions and distortions of science online. By mapping current research efforts and highlighting open problems, this survey lays the groundwork for developing robust datasets, methods, and evaluation frameworks to advance the automated processing of scientific web claims, a necessary capability for strengthening the reliability of science-related online discourse at scale.
The Discovery Engine: A Framework for AI-Driven Synthesis and Navigation of Scientific Knowledge Landscapes
Scientific progress relies on the effective accumulation, synthesis, and critical evaluation of knowledge. Traditionally, the well-documented, peer reviewed publication served as the primary standard for filtering and disseminating credible findings within the scientific community. Recently, however, we are witnessing an unprecedented acceleration in research output, a veritable explosion of scientific publications across all disciplines [1]. Yet, this very abundance creates a paradox: the sheer volume threatens to overwhelm the mechanisms designed for its assimilation and synthesis. Researchers, even within highly specialized subfields, face an almost insurmountable challenge in keeping abreast of relevant developments, integrating disparate findings, and identifying the truly novel signals amidst the noise [2]. This information overload contributes to disciplinary fragmentation, hindering the cross-pollination of ideas essential for disruptive innovation [3]. Furthermore, persistent concerns regarding "reproducibility crisis" [2], predatory journals, inflation of research areas[4], growing retractions and the potential influences of bibliometrics on research direction [5] highlight systemic challenges in validating and prioritizing scientific contributions to fundamental knowledge.
Reproducible, citation-aware automated paper reviews @seanjungblluth.bsky.social - ATmosphereConf 20
Introducing Citations on the Anthropic API | Claude
Claude can now cite specific passages from your documents, delivering verifiable responses with built-in source tracking. Update: Now available in Amazon Bedrock. (June 30, 2025) Today, we're launching Citations, a new API feature that lets Claude ground its answers in source documents.

Incorrect Citation Association for Articles in Online-Only Springer Nature Journals
We show that citation metrics of journal articles in many of the online-only Springer Nature journals and associated ones are distorted, going back to articles from 2001. We find that most likely due to an API response error, there are many incorrect references which typically lead to Article Number 1 of a given Volume. Among others, the issue affects journals such as Scientific Reports, Nature Communications, Communications journals, Cell Death & Disease, Light: Science & Applications, as well as many BMC, Discovery and npj journals. Beyond the negative effect of introducing incorrect reference information, this distorts the citation statistics of articles in these journals, with a few articles being massively over-cited compared to their peers, while many lose citations; e.g. both in Scientific Reports and in Nature Communications, 5 of the 10 top cited articles have article numbers of 1. We validate the distorted statistics by assessing data from multiple scientific literature databases: Crossref, OpenCitations, Semantic Scholar, and the journals' websites. The issue primarily arises from the inconsistent transition from page-based referencing of articles to article number-based referencing, as well as the improper handling of the change in the publisher's article metadata API. It seems that the most pressing problem has been present since approximately 2011, which we estimate affects the citation count of millions of authors.

Science Live - The Platform for FAIR Research
Transform research into FAIR nanopublications. Create, discover, cite, and embed structured knowledge bricks.
Crossref: The sustainable source of community-owned scholarly metadata
This paper describes the scholarly metadata collected and made available by Crossref, as well as its importance in the scholarly research ecosystem. Containing over 106 million records and expanding at an average rate of 11% a year, Crossref’s metadata has become one of the major sources of scholarly data for publishers, authors, librarians, funders, and researchers. The metadata set consists of 13 content types, including not only traditional types, such as journals and conference papers, but also data sets, reports, preprints, peer reviews, and grants. The metadata is not limited to basic publication metadata, but can also include abstracts and links to full text, funding and license information, citation links, and the information about corrections, updates, retractions, etc. This scale and breadth make Crossref a valuable source for research in scientometrics, including measuring the growth and impact of science and understanding new trends in scholarly communications. The metadata is available through a number of APIs, including REST API and OAI-PMH. In this paper, we describe the kind of metadata that Crossref provides and how it is collected and curated. We also look at Crossref’s role in the research ecosystem and trends in metadata curation over the years, including the evolution of its citation data provision. We summarize the research used in Crossref’s metadata and describe plans that will improve metadata quality and retrieval in the future.

The Research Nexus vision for a more connected scholarly community
Crossref envisions “a rich and reusable open network of relationships connecting research organizations, people, things, and actions; a scholarly record that the global community can build on forever, for the benefit of society”. This Research Nexus expands on the importance of research objects being persistently and uniquely identified. The scholarly community has an established practice of connecting things such as citations to others’ work and it is increasingly critical to identify relationships beyond citations, bringing together published work, unpublished work, institutions, individuals, and identifying the actions that they take e.g., funding, publishing, creating, modifying, citing, and sharing. The Research Nexus brings together metadata and relationships to build a joined-up picture of the scholarly ecosystem and helps everyone identify these relationships and how they change through time. This vision is possible if all parts of the scholarly ecosystem (and beyond) work together, including various scholarly infrastructure organizations.

Halupedia: An AI-Generated Wikipedia-Style Encyclopedia of Fabricated Knowledge and Absurd AI Fabulation - BizTech Weekly
Analysis of Halupedia’s AI-driven on-demand encyclopedia model reveals real-time, non-persistent article generation that simulates authoritative references through fabricated citations and internal “canon” consistency, highlighting challenges in provenance, hallucination, moderation, and the evolving trade-offs between novelty-driven engagement and information integrity in generative AI systems.

Two billion citation links in Crossref help research travel further - Crossref
We’ve recently reached an important milestone for the research nexus: the works in our metadata corpus are now connected with over 2 billion citation links! This is a great opportunity to share a dedicated dataset and discuss why these are important for science.

Metagov x Future of Science Seminar - Discourse Graphs with Matt Akamatsu
Great post! There is a clear parallel to how the @atproto.science ecosystem can disrupt the extractive science publishing industry & bring on millions of researchers with a new cooperative research stack. The system is ripe for disruption - see also @edhagen.net's post in the thread linked below >
Joe Basser
Who wants to make money in the Atmosphere? 🙋♂️
TLDR in English Just did an automation using @airglow.run that will save me so much work from now on Every tangled repo I give a star will now be saved into my @semble.so collection for atproto-related repos, using the permanent URL
Victoria
Mal conheço o Airglow e já considero PACAS Acabei de fazer uma automação que vai me poupar um trabalhão Todo repositório do Tangled que eu dar uma estrela, vai ser automaticamente salvo numa coleção do Semble, E USANDO URL PERMANENTE (que usa DID e não handle)!!!!! airglow.run/u/vicwalker.dev.br/3ml5ixicbo…